Co-expression analysis

Gene ID	1622345_at
Gene name	hypothetical protein LOC100266705
Homology with Arabidopsis	Similar to At1g73050: (R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative (HF=3e-14)
Module size	6 genes
NF	0.61
%ile	88.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.95	1622345_at	CB970837	hypothetical protein LOC100266705	-	3e-14	At1g73050	(R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.94	1618519_at	CF214731	hypothetical protein LOC100253375	-	3e-5	At5g49300	zinc finger (GATA type) family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1614812_s_at	CF372270	hypothetical protein LOC100265283	-	2e-27	At3g02580	STE1 (STEROL 1)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.95	1606948_at	CF404230	hypothetical protein LOC100266705	-	2e-2	At1g74530	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.95	1608397_at	CB971352	hypothetical protein LOC100250547	-	4e+0	At3g26420	ATRZ-1A	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.95	1622295_at	CF215662	beta-galactosidase	-	5e+0	At4g21560	VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8
2.3	90.7	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436417	V. riparia (VR, PI588259) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
2.1	89.1	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
2.1	89.1	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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