Co-expression analysis

Gene ID 1622344_at
Gene name hypothetical protein LOC100241684
Homology with ArabidopsisSimilar to At2g03620: magnesium transporter CorA-like family protein (MRS2-5) (HF=1e+0)
Module size 38 genes
NF 0.47
%ile 69.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9095.60.901622344_atCD715623hypothetical protein LOC100241684-1e+0At2g03620magnesium transporter CorA-like family protein (MRS2-5)O.I.H.G.S.X.
0.6988.30.971608822_atCF211356hypothetical protein LOC100246732-8e-6At3g46780PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE 16)O.I.H.G.S.X.
0.6888.00.921610245_atCF209798hypothetical protein LOC100252066-1e-20At2g34430LHB1B1O.I.H.G.S.X.
0.6484.70.921619629_atCB340944hypothetical protein LOC100251653-4e-56At5g54270LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)O.I.H.G.S.X.
0.6384.30.941606656_atCF212763hypothetical protein LOC100262729-1e-1At4g22460protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.6081.90.911612848_x_atCF202280.1--2e-19At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)O.I.H.G.S.X.
0.6081.90.971613266_atCA815997hypothetical protein LOC100250168-2e+0At3g16690nodulin MtN3 family proteinO.I.H.G.S.X.
0.6081.90.971611924_atCA817406hypothetical protein LOC100244683-2e-9At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.
0.6081.90.971611464_atCF215949hypothetical protein LOC100255844-2e-8At1g45474LHCA5O.I.H.G.S.X.
0.5980.60.961607381_atCB973030hypothetical protein LOC100245212-7e-5At4g27700rhodanese-like domain-containing proteinO.I.H.G.S.X.
0.5679.40.971615822_atCF208321hypothetical protein LOC100260599-3e-92At5g54270LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)O.I.H.G.S.X.
0.5679.40.971614293_atCD719387hypothetical protein LOC100257708-5e-3At5g21430DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.5577.30.961608528_atCD798772hypothetical protein LOC100263742-4e-4At1g03600photosystem II family proteinO.I.H.G.S.X.
0.5577.30.971613642_atCB002851hypothetical protein LOC100244962-9e-18At1g08380PSAO (photosystem I subunit O)O.I.H.G.S.X.
0.5475.70.971617206_s_atCB340600hypothetical protein LOC100244962-8e-1At5g67600unknown proteinO.I.H.G.S.X.
0.5375.20.961616560_atCA817733hypothetical protein LOC100243962-3e-24At1g19150LHCA6O.I.H.G.S.X.
0.5273.90.931607391_atX98542.1glutamate synthase (ferredoxin)-5e-103At5g04140GLU1 (GLUTAMATE SYNTHASE 1)O.I.H.G.S.X.
0.5173.20.951609560_atBQ796714--3e-16At5g37360unknown proteinO.I.H.G.S.X.
0.5173.20.971612195_atCF211659hypothetical protein LOC100255593-6e-9At2g26500cytochrome b6f complex subunit (petM), putativeO.I.H.G.S.X.
0.5173.20.971607516_atCB972913hypothetical protein LOC100260811-9e-22At5g66570PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)O.I.H.G.S.X.
0.4969.30.971607453_atCA814565hypothetical protein LOC100243309-6e-3At5g08050-O.I.H.G.S.X.
0.4666.50.971621672_atCB342264hypothetical protein LOC100267324-2e-34At5g05740EGY2O.I.H.G.S.X.
0.4564.60.921618497_atCB345020hypothetical protein LOC100266170-2e-2At2g26080AtGLDP2 (Arabidopsis thaliana glycine decarboxylase P-protein 2)O.I.H.G.S.X.
0.4464.10.961612945_s_atCF213687hypothetical protein LOC100254639-1e-26At1g54780thylakoid lumen 18.3 kDa proteinO.I.H.G.S.X.
0.3954.90.981621532_atCB973721hypothetical protein LOC100261762-7e-6At1g30380PSAK (photosystem I subunit K)O.I.H.G.S.X.
0.3853.60.971619879_s_atCB340231hypothetical protein LOC100259229-4e-32At1g32470glycine cleavage system H protein, mitochondrial, putativeO.I.H.G.S.X.
0.3853.60.961615322_atCB342395hypothetical protein LOC100250934-3e-5At5g19940plastid-lipid associated protein PAP-related / fibrillin-relatedO.I.H.G.S.X.
0.3751.70.951609873_atCB341501hypothetical protein LOC100247523-2e-69At1g67280lactoylglutathione lyase, putative / glyoxalase I, putativeO.I.H.G.S.X.
0.3650.70.951607056_atCB035965hypothetical protein LOC100267459-2e-24At5g45930CHLI2 (MAGNESIUM CHELATASE I2)O.I.H.G.S.X.
0.3650.70.951618209_atCF373021--3e-17At4g09010APX4 (ASCORBATE PEROXIDASE 4)O.I.H.G.S.X.
0.3650.70.961610525_atCA814677hypothetical protein LOC100260680-2e-15At1g50900-O.I.H.G.S.X.
0.3446.80.951608824_atCF589271hypothetical protein LOC100250549-1e-15At1g32520unknown proteinO.I.H.G.S.X.
0.3446.80.981614409_atCA817387hypothetical protein LOC100266036-1e-72At3g61470LHCA2O.I.H.G.S.X.
0.3345.70.971622715_s_atCA809281hypothetical protein LOC100246378-3e-68At1g12900GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)O.I.H.G.S.X.
0.3243.10.961608391_atCA817568hypothetical protein LOC100255376-5e-12At1g60230radical SAM domain-containing proteinO.I.H.G.S.X.
0.3141.30.981617428_atCB344473hypothetical protein LOC100259814-7e-57At1g42970GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT)O.I.H.G.S.X.
0.2837.70.931613382_atCA817041hypothetical protein LOC100257375-4e-13At1g06690aldo/keto reductase family proteinO.I.H.G.S.X.
0.2734.00.961609325_atCB001903hypothetical protein LOC100267099-2e-14At2g27680aldo/keto reductase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.793.0GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.683.3GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.683.3GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436358Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.581.7GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.581.7GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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