Co-expression analysis

Gene ID	1622302_s_at
Gene name	hypothetical protein LOC100245459
Homology with Arabidopsis	Similar to At5g66570: PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1) (HF=2e-19)
Module size	6 genes
NF	0.75
%ile	96.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.98	1622302_s_at	CF207602	hypothetical protein LOC100245459	-	2e-19	At5g66570	PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)	O.I.	H.G.	S.X.	Please select
0.91	98.8	0.99	1613494_s_at	CA813944	probable oxygen-evolving enhancer protein 2	-	2e-22	At1g06680	PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1)	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1611582_s_at	CB970190	hypothetical protein LOC100245393	-	5e-5	At1g44575	NPQ4 (NONPHOTOCHEMICAL QUENCHING)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1613447_s_at	CA814567	chlorophyll a/b binding protein	-	1e-4	At1g61520	LHCA3	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1617645_s_at	CA818763	hypothetical protein LOC100257292	-	2e-96	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1614784_s_at	CB968637	chlorophyll a/b binding protein	-	3e-46	At1g61520	LHCA3	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.1	98.1	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.6	97.6	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
4.4	97.3	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.8	96.4	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
3.2	94.9	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
3.1	94.6	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.1	94.6	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
3.0	94.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.9	93.8	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
2.9	93.8	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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