Co-expression analysis

Gene ID 1622299_s_at
Gene name hypothetical protein LOC100255647
Homology with ArabidopsisSimilar to At5g54190: PORA (HF=7e-10)
Module size 6 genes
NF 0.37
%ile 55.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4464.10.941622299_s_atCK136935.1hypothetical protein LOC100255647-7e-10At5g54190PORAO.I.H.G.S.X.
0.4767.70.941607621_atCF406023hypothetical protein LOC100259213-2e-5At5g13400proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.4260.10.941612100_atCF215638hypothetical protein LOC100248200-4e+0At5g03840TFL1 (TERMINAL FLOWER 1)O.I.H.G.S.X.
0.3853.60.931609644_atBQ799340hypothetical protein LOC100260722 /// hypothetical protein LOC100260971 /// hypothetical protein LOC100262489-2e-14At2g24280serine carboxypeptidase S28 family proteinO.I.H.G.S.X.
0.2632.00.951609122_atCB003768hypothetical protein LOC100267142-7e-27At2g04530CPZO.I.H.G.S.X.
0.2530.50.951612553_atCF514076hypothetical protein LOC100255895-4e-36At5g14260SET domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM287881Green soft berry B10 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.893.4GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436361Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM287887Green soft berry C23 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436366Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM436404V. riparia (VR, PI588259) LD, 15h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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