Co-expression analysis

Gene ID	1622257_at
Gene name	hypothetical protein LOC100261234
Homology with Arabidopsis	Similar to At1g72710: CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2) (HF=5e-23)
Module size	6 genes
NF	0.45
%ile	67.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.8	0.96	1622257_at	CF210952	hypothetical protein LOC100261234	-	5e-23	At1g72710	CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.95	1621632_at	BQ794172	hypothetical protein LOC100266611	-	9e-28	At3g54020	phosphatidic acid phosphatase-related / PAP2-related	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1610846_at	CD712086	-	-	6e-6	At4g10010	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.95	1612682_at	CA816773	hypothetical protein LOC100259846	-	4e+0	At3g44380	-	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1615471_at	CF208995	hypothetical protein LOC100263916	-	5e-60	At1g74380	XXT5 (XYLOGLUCAN XYLOSYLTRANSFERASE 5)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.95	1609687_at	CB008253	hypothetical protein LOC100252580	-	1e-3	At4g32285	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.6	92.5	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.5	91.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.5	91.9	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436392	V. riparia (VR, PI588259) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.3	90.7	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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