Co-expression analysis

Gene ID 1622244_at
Gene name
Homology with ArabidopsisSimilar to At3g03828: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.01
%ile 1.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.771622244_atCF404824--1e+0At3g03828unknown proteinO.I.H.G.S.X.
0.045.20.901613426_atCF405022--3e+0At3g114704'-phosphopantetheinyl transferase family proteinO.I.H.G.S.X.
0.023.20.921615703_atCB340165--2e+0At2g03740late embryogenesis abundant domain-containing protein / LEA domain-containing proteinO.I.H.G.S.X.
0.012.10.931615937_atCK138171.1--2e-36At1g17730VPS46.1 (VACUOLAR PROTEIN SORTING 46.1)O.I.H.G.S.X.
0.012.10.931622174_atCB912233hypothetical protein LOC100241032-5e+0At4g38090unknown proteinO.I.H.G.S.X.
-0.50.951610845_atCF208629hypothetical protein LOC100245365-2e+0At1g68030PHD finger protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.798.5GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.390.7GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.289.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.088.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.088.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.987.2GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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