Co-expression analysis

Gene ID 1622242_s_at
Gene name hypothetical protein LOC100264895
Homology with ArabidopsisSimilar to At5g57565: protein kinase family protein (HF=1e+0)
Module size 8 genes
NF 0.41
%ile 61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7088.60.971622242_s_atCF206374.1hypothetical protein LOC100264895-1e+0At5g57565protein kinase family proteinO.I.H.G.S.X.
0.5779.80.971610900_atCF516848hypothetical LOC100244581-2e-1At1g78480prenyltransferase/squalene oxidase repeat-containing proteinO.I.H.G.S.X.
0.5273.90.971615236_atBQ796877--1e+0At5g48595-O.I.H.G.S.X.
0.4361.50.971618539_atCF513048hypothetical protein LOC100267633-1e-2At2g41950unknown proteinO.I.H.G.S.X.
0.4260.10.971620204_atBQ792129--8e-1At1g20070unknown proteinO.I.H.G.S.X.
0.3650.70.981621053_atCF414284hypothetical protein LOC100258640-1e-9At1g66430pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.2734.00.981613278_atCF212139hypothetical protein LOC100255222-4e+0At2g20760protein binding / structural moleculeO.I.H.G.S.X.
0.1718.20.971608770_atCF211789--6e-21At3g60620phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.692.5GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.591.9GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO
2.491.3GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.491.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.289.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.289.9GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO
2.189.1GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
2.088.2GSM147674Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation3Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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