Co-expression analysis

Gene ID	1622241_x_at
Gene name
Homology with Arabidopsis	Similar to At2g22155: - (HF=4e-1)
Module size	7 genes
NF	0.09
%ile	16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	91.3	0.82	1622241_x_at	CF205868.1	-	-	4e-1	At2g22155	-	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.89	1618276_at	CB349729	-	-	2e-2	At2g37600	60S ribosomal protein L36 (RPL36A)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.90	1614522_at	CF202455.1	-	-	4e+0	At5g06040	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.92	1620683_at	CA811381	hypothetical protein LOC100245630	-	8e-9	At4g26160	ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.90	1608546_at	CF212193	hypothetical protein LOC100254967	-	1e+1	At5g49230	HRB1 (HYPERSENSITIVE TO RED AND BLUE)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.89	1619820_s_at	CA811381	hypothetical protein LOC100245630	-	8e-9	At4g26160	ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.91	1606798_at	CF209842	glutamine synthetase	-	5e-42	At3g17820	ATGSKB6	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.7	93.0	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.5	91.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.5	91.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.3	90.7	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
2.3	90.7	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.3	90.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.2	89.9	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.2	89.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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