Co-expression analysis

Gene ID	1622206_at
Gene name	hypothetical protein LOC100255112
Homology with Arabidopsis	Similar to At5g66440: unknown protein (HF=1e+1)
Module size	6 genes
NF	0.04
%ile	9.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.86	1622206_at	CF510827	hypothetical protein LOC100255112	-	1e+1	At5g66440	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.91	1621537_at	CF413878	-	-	3e-1	At3g58840	-	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.90	1614109_at	CF204230.1	hypothetical protein LOC100259033	-	1e+0	At1g48510	cytochrome c oxidase assembly protein surfeit-related	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.93	1615583_at	CD800165	-	-	2e-1	At1g71340	glycerophosphoryl diester phosphodiesterase family protein	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.89	1619105_at	CF202023.1	-	-	3e-1	At1g76220	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.91	1611353_at	CK138189.1	-	-	1e-9	At3g57780	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.0	88.2	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.0	88.2	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436359	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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