Co-expression analysis

Gene ID	1622173_at
Gene name
Homology with Arabidopsis	Similar to At5g12020: HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) (HF=3e-6)
Module size	6 genes
NF	0.01
%ile	1.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.83	1622173_at	CD719685	-	-	3e-6	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.85	1611052_at	CD718520	-	-	4e-7	At5g12030	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.94	1616784_at	CD007778	-	-	5e-45	At3g19640	magnesium transporter CorA-like family protein (MRS2-3)	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.89	1615907_at	CF568951	-	-	1e+0	At5g64940	ATATH13	O.I.	H.G.	S.X.	Please select
-	0.5	0.94	1618545_a_at	CB346750	hypothetical LOC100265979	-	2e-50	At1g12270	stress-inducible protein, putative	O.I.	H.G.	S.X.	Please select
-	0.5	0.94	1616706_at	CF207563	hypothetical LOC100265979	-	8e-11	At4g12400	stress-inducible protein, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
3.2	94.9	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9	93.8	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.7	93.0	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.5	91.9	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.4	91.3	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.3	90.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.2	89.9	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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