Co-expression analysis

Gene ID	1622102_at
Gene name
Homology with Arabidopsis	Similar to At5g04047: - (HF=1e+0)
Module size	6 genes
NF	0.48
%ile	71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.8	0.95	1622102_at	CD010899	-	-	1e+0	At5g04047	-	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.95	1608005_at	CF204974.1	-	-	1e+0	At1g48730	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.95	1607695_at	CF208550	-	-	2e-9	At1g15880	GOS11 (golgi snare 11)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.95	1607689_at	CF203350.1	-	-	3e-8	At4g34100	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.96	1618080_at	CF202367.1	-	-	2e+0	At4g28556	RIC7	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.96	1615875_at	CB981816	hypothetical protein LOC100262865	-	6e-2	At3g01516	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3
2.1	89.1	GSM436381	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.0	88.2	GSM436376	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
1.8	86.0	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
1.7	84.7	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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