Co-expression analysis

Gene ID	1622069_at
Gene name
Homology with Arabidopsis	Similar to At1g74340: dolichol phosphate-mannose biosynthesis regulatory protein-related (HF=2e+0)
Module size	6 genes
NF	0.05
%ile	11.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.83	1622069_at	CD801772	-	-	2e+0	At1g74340	dolichol phosphate-mannose biosynthesis regulatory protein-related	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.95	1612558_at	CA818826	-	-	7e-2	At4g20280	TAF11 (TBP-ASSOCIATED FACTOR 11)	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.94	1618464_at	CB971707	hypothetical protein LOC100254825	-	2e-11	At1g30130	unknown protein	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.92	1612732_at	CD714809	-	-	2e-25	At1g53400	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.94	1621283_at	AF257777.1	H+-pyrophosphatase	-	1e-93	At1g15690	AVP1	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.95	1616455_s_at	BQ792207	hypothetical protein LOC100250281	-	4e-1	At4g33750	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	96.9	GSM436364	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.5	91.9	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436375	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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