Co-expression analysis

Gene ID 1622018_at
Gene name
Homology with ArabidopsisSimilar to At4g31320: auxin-responsive protein, putative / small auxin up RNA (SAUR_C) (HF=9e-7)
Module size 6 genes
NF 0.05
%ile 10.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.801622018_atCB978885--9e-7At4g31320auxin-responsive protein, putative / small auxin up RNA (SAUR_C)O.I.H.G.S.X.
0.3141.30.951608846_atBQ792744--3e-9At2g40800-O.I.H.G.S.X.
0.056.00.951607720_atCB975677--2e+1At5g43680unknown proteinO.I.H.G.S.X.
0.045.20.931620803_atCD802327--2e-5At4g09070-O.I.H.G.S.X.
0.045.20.951612087_atCB339591--2e+0At2g28140unknown proteinO.I.H.G.S.X.
0.012.10.941617761_atCB005291--6e-4At1g59660nucleoporin family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.0GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.993.8GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.692.5GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.491.3GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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