Co-expression analysis

Gene ID 1622010_at
Gene name similar to RNA polymerase alpha subunit
Homology with ArabidopsisSimilar to Atcg00740: - (HF=0)
Module size 6 genes
NF 0.57
%ile 84.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.971622010_atCF207538similar to RNA polymerase alpha subunit-0Atcg00740-O.I.H.G.S.X.
0.6787.90.971616888_atCF403623similar to lactoylglutathione lyase, putative / glyoxalase I, putative-3e-73At1g67280lactoylglutathione lyase, putative / glyoxalase I, putativeO.I.H.G.S.X.
0.6384.30.971610711_s_atCF606982--4e+0At4g28085unknown proteinO.I.H.G.S.X.
0.6081.90.971614503_atCB972598--0Atcg00740-O.I.H.G.S.X.
0.4666.50.971620755_atCD798406hypothetical protein LOC100248862-7e-20At1g27385unknown proteinO.I.H.G.S.X.
0.3954.90.971608952_atCF414365hypothetical protein LOC100254862-9e-33At3g06730thioredoxin family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.294.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.294.9GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.993.8GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.993.8GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
2.591.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.491.3GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.390.7GSM147713Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation42Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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