Co-expression analysis

Gene ID	1622000_s_at
Gene name	hypothetical protein LOC100242169
Homology with Arabidopsis	Similar to At3g27329: - (HF=1e+0)
Module size	8 genes
NF	0.50
%ile	75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	84.7	0.97	1622000_s_at	CF604800	hypothetical protein LOC100242169	-	1e+0	At3g27329	-	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1611994_a_at	CF214487	hypothetical protein LOC100260925	-	7e-8	At1g32230	RCD1 (RADICAL-INDUCED CELL DEATH1)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1619732_at	CF517983	hypothetical protein LOC100267623	-	5e-15	At5g53000	TAP46 (2A phosphatase associated protein of 46 kD)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.98	1621533_at	CF514195	hypothetical protein LOC100248579	-	5e-45	At4g01810	protein transport protein-related	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1611784_at	CB971421	hypothetical protein LOC100256712	-	2e-37	At3g07300	eukaryotic translation initiation factor 2B family protein / eIF-2B family protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1617936_at	BQ797736	similar to 26S proteasome subunit RPN5b	-	3e-23	At5g64760	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1607136_at	CF605014	hypothetical protein LOC100257366	-	4e-28	At4g38630	RPN10 (REGULATORY PARTICLE NON-ATPASE 10)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1611078_a_at	CF518728	hypothetical protein LOC100260925	-	1e-7	At1g32230	RCD1 (RADICAL-INDUCED CELL DEATH1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.1	89.1	GSM147690	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	19
2.0	88.2	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.9	87.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
1.9	87.2	GSM147691	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation	20
1.9	87.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
1.8	86.0	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
1.8	86.0	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
1.8	86.0	GSM147695	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	24

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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