Co-expression analysis

Gene ID 1622000_s_at
Gene name hypothetical protein LOC100242169
Homology with ArabidopsisSimilar to At3g27329: - (HF=1e+0)
Module size 8 genes
NF 0.50
%ile 75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6484.70.971622000_s_atCF604800hypothetical protein LOC100242169-1e+0At3g27329-O.I.H.G.S.X.
0.8093.60.981611994_a_atCF214487hypothetical protein LOC100260925-7e-8At1g32230RCD1 (RADICAL-INDUCED CELL DEATH1)O.I.H.G.S.X.
0.5375.20.981619732_atCF517983hypothetical protein LOC100267623-5e-15At5g53000TAP46 (2A phosphatase associated protein of 46 kD)O.I.H.G.S.X.
0.4361.50.981621533_atCF514195hypothetical protein LOC100248579-5e-45At4g01810protein transport protein-relatedO.I.H.G.S.X.
0.4057.70.981611784_atCB971421hypothetical protein LOC100256712-2e-37At3g07300eukaryotic translation initiation factor 2B family protein / eIF-2B family proteinO.I.H.G.S.X.
0.3853.60.981617936_atBQ797736similar to 26S proteasome subunit RPN5b-3e-23At5g64760RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)O.I.H.G.S.X.
0.3853.60.981607136_atCF605014hypothetical protein LOC100257366-4e-28At4g38630RPN10 (REGULATORY PARTICLE NON-ATPASE 10)O.I.H.G.S.X.
0.3345.70.981611078_a_atCF518728hypothetical protein LOC100260925-1e-7At1g32230RCD1 (RADICAL-INDUCED CELL DEATH1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.591.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.189.1GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19Link to GEO
2.088.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.987.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.987.2GSM147691Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation20Link to GEO
1.987.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.886.0GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.886.0GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
1.886.0GSM147695Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation24Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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