Co-expression analysis

Gene ID 1621997_s_at
Gene name hypothetical protein LOC100259237
Homology with ArabidopsisSimilar to At1g14200: zinc finger (C3HC4-type RING finger) family protein (HF=2e-1)
Module size 6 genes
NF 0.10
%ile 17.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.941621997_s_atCF512249hypothetical protein LOC100259237-2e-1At1g14200zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1819.40.951609527_atCD802146hypothetical protein LOC100246030 /// hypothetical protein LOC100257953-1e+0At5g55080AtRAN4 (Ras-related nuclear protein 4)O.I.H.G.S.X.
0.1212.10.951613012_atCD003909hypothetical protein LOC100242323-9e-15At5g24010protein kinase family proteinO.I.H.G.S.X.
0.1111.30.961606534_atCF516519hypothetical protein LOC100261660-1e+0At5g02420unknown proteinO.I.H.G.S.X.
0.088.50.941619842_s_atBQ793715hypothetical protein LOC100244132-1e+0At5g08220unknown proteinO.I.H.G.S.X.
0.045.20.951610277_atCF208016hypothetical protein LOC100257821-2e-1At1g17710phosphataseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.2GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM287887Green soft berry C23 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM147677Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation6Link to GEO
2.390.7GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM147707Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation36Link to GEO
2.390.7GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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