Co-expression analysis

Gene ID 1621989_at
Gene name
Homology with ArabidopsisSimilar to At4g19230: CYP707A1 (HF=3e-21)
Module size 6 genes
NF 0.04
%ile 9.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4260.10.721621989_atCD006576--3e-21At4g19230CYP707A1O.I.H.G.S.X.
0.3853.60.761620258_atAY427195.1--2e-2At1g14370APK2A (PROTEIN KINASE 2A)O.I.H.G.S.X.
0.1718.20.731608945_atBQ793580hypothetical protein LOC100263523-5e-32At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)O.I.H.G.S.X.
0.034.20.731614908_atCF413969--4e-1At2g33860ETT (ETTIN)O.I.H.G.S.X.
0.023.20.721621829_atCF608402hypothetical protein LOC100242154-8e-8At5g09440EXL4 (EXORDIUM LIKE 4)O.I.H.G.S.X.
0.012.10.751613837_atCF605759hypothetical protein LOC100248706-4e-4At1g47670amino acid transporter family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.799.6GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.996.6GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.896.4GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.595.7GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.395.2GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM287886Green soft berry C22 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM287879Green hard berry C19 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM436387Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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