Co-expression analysis

Gene ID	1621958_at
Gene name	hypothetical protein LOC100263890
Homology with Arabidopsis	Similar to At3g12685: - (HF=4e-6)
Module size	6 genes
NF	0.19
%ile	28.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.95	1621958_at	CF203054.1	hypothetical protein LOC100263890	-	4e-6	At3g12685	-	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.95	1616407_at	CD715829	hypothetical protein LOC100250971	-	7e-9	At1g52510	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1610420_at	CA816989	hypothetical protein LOC100263772	-	6e-30	At1g73060	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.95	1610774_at	CD012179	hypothetical protein LOC100268058	-	2e-25	At4g39710	immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.96	1621285_at	CB347466	hypothetical protein LOC100251632	-	3e-24	At4g01310	ribosomal protein L5 family protein	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.95	1618918_at	CA817284	-	-	3e-10	At1g78915	binding	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	95.5	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
3.0	94.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.9	93.8	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.8	93.4	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
2.7	93.0	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.7	93.0	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.6	92.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.6	92.5	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.5	91.9	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.5	91.9	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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