Co-expression analysis

Gene ID 1621937_at
Gene name hypothetical protein LOC100245655
Homology with ArabidopsisSimilar to At4g02810: unknown protein (HF=2e-1)
Module size 10 genes
NF 0.82
%ile 98.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5475.70.921621937_atCK138151.1hypothetical protein LOC100245655-2e-1At4g02810unknown proteinO.I.H.G.S.X.
0.8995.50.951618561_atCF204500.1hypothetical protein LOC100246875-2e-5At3g03980short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.8995.50.951622012_atCF204966.1--2e-2At1g62760invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.8995.50.961621244_s_atCD797552hypothetical protein LOC100246875-2e-5At3g03980short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.8695.10.961617334_s_atCF607954--1e-9At5g65660hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.8494.80.951606845_atCF212991hypothetical protein LOC100257315-1e+0At3g52510-O.I.H.G.S.X.
0.8293.90.951612288_atCB969093--3e-1At4g09040RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.8293.90.961606429_atCF373019hypothetical protein LOC100251832-2e-1At4g12390PME1 (PECTIN METHYLESTERASE INHIBITOR 1)O.I.H.G.S.X.
0.7892.60.931616735_atCF604749hypothetical protein LOC100257315-1e+0At5g50470NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7)O.I.H.G.S.X.
0.6484.70.951620319_s_atCF205531.1R2R3 Myb14 transcription factor-9e-2At4g11660AT-HSFB2BO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.491.3GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.289.9GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.289.9GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.189.1GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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