Co-expression analysis

Gene ID 1621926_at
Gene name
Homology with ArabidopsisSimilar to At4g25310: oxidoreductase, 2OG-Fe(II) oxygenase family protein (HF=1e+0)
Module size 15 genes
NF 0.28
%ile 39.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9095.60.961621926_atCF373241--1e+0At4g25310oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.4057.70.971608735_atCF605804--3e+0At5g41960unknown proteinO.I.H.G.S.X.
0.3853.60.971612192_s_atCF518716similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase-8e-86At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.
0.3548.50.971616744_atCD004223hypothetical protein LOC100247994-1e+0At3g21570unknown proteinO.I.H.G.S.X.
0.3548.50.981622075_atCD799862--2e-16At5g20990B73O.I.H.G.S.X.
0.3345.70.971612986_atCB348805hypothetical protein LOC100249064-5e-16At1g73180eukaryotic translation initiation factor-relatedO.I.H.G.S.X.
0.2837.70.981622610_atCF413855hypothetical protein LOC100264665-5e-6At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)O.I.H.G.S.X.
0.2428.70.981617299_atCD801559hypothetical protein LOC100249941-3e-31At2g46225ABIL1 (Abi-1-like 1)O.I.H.G.S.X.
0.2225.60.971611056_atBQ799758hypothetical protein LOC100251208-7e-3At2g27760ATIPT2 (TRNA ISOPENTENYLTRANSFERASE 2)O.I.H.G.S.X.
0.2124.00.981622833_atCB914653--4e+0At4g10767SCRL21 (SCR-Like 21)O.I.H.G.S.X.
0.2022.40.981611911_atCF212492hypothetical protein LOC100266461-1e-121At5g08530CI51 (51 kDa subunit of complex I)O.I.H.G.S.X.
0.1718.20.981619344_s_atCB968636hypothetical protein LOC100248250-2e+0At3g51730saposin B domain-containing proteinO.I.H.G.S.X.
0.1414.40.981614421_atCB914634hypothetical protein LOC100257774-3e-1At4g22666-O.I.H.G.S.X.
0.1414.40.981608447_atCB913704hypothetical protein LOC100244219-3e-1At3g44620protein tyrosine phosphataseO.I.H.G.S.X.
0.1010.30.981617139_s_atCF202008.1hypothetical protein LOC100246711-7e+0At5g37580-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM436387Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM436386Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436385Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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