Co-expression analysis

Gene ID	1621903_at
Gene name	UPF0497 membrane protein 15
Homology with Arabidopsis	Similar to At4g09170: unknown protein (HF=2e+0)
Module size	14 genes
NF	0.20
%ile	28.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	84.7	0.91	1621903_at	CF404558	UPF0497 membrane protein 15	-	2e+0	At4g09170	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.94	1621179_at	CF413861	-	-	2e-1	At4g09070	-	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.94	1610936_at	CB972355	hypothetical protein LOC100259946	-	2e-1	At3g14870	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.93	1621051_at	CK136957.1	hypothetical protein LOC100260608	-	4e-4	At4g15260	UDP-glucoronosyl/UDP-glucosyl transferase family protein	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.94	1614764_at	BQ794515	hexose transporter HT2	-	9e-5	At1g34580	monosaccharide transporter, putative	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.95	1615277_at	CF201654.1	-	-	4e-31	At1g27970	NTF2B (NUCLEAR TRANSPORT FACTOR 2B)	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.97	1614959_at	BQ799150	hypothetical protein LOC100257499	-	1e-10	At5g47060	senescence-associated protein-related	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.96	1618189_at	CB003356	-	-	3e-2	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.95	1608286_at	CD797963	hypothetical protein LOC100253910	-	1e+0	At2g32050	cell cycle control protein-related	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.95	1613776_at	BQ796788	hypothetical LOC100254074	-	3e-9	At1g19850	MP (MONOPTEROS)	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.95	1607560_at	BQ797165	hypothetical protein LOC100255800	-	5e-12	At3g59030	TT12 (TRANSPARENT TESTA 12)	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.92	1608973_at	CD802362	hypothetical LOC100259334	-	3e-4	At1g71010	phosphatidylinositol-4-phosphate 5-kinase family protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.96	1613355_at	CB922574	hypothetical protein LOC100260952	-	6e-12	At5g07360	amidase family protein	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.92	1613182_at	CB982869	hypothetical protein LOC100266622	-	5e-18	At3g06483	PDK (PYRUVATE DEHYDROGENASE KINASE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.8	99.0	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.0	98.7	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.1	89.1	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.0	88.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.9	87.2	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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