Co-expression analysis

Gene ID 1621849_at
Gene name hypothetical protein LOC100249556
Homology with ArabidopsisSimilar to At4g00810: 60S acidic ribosomal protein P1 (RPP1B) (HF=2e-5)
Module size 6 genes
NF 0.37
%ile 55.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.961621849_atCF203866.1hypothetical protein LOC100249556-2e-5At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.
0.5980.60.961610463_atCF204701.1hypothetical protein LOC100246159-1e-53At4g1739060S ribosomal protein L15 (RPL15B)O.I.H.G.S.X.
0.5072.70.961619587_atCF200656.1--1e-9At4g3386540S ribosomal protein S29 (RPS29C)O.I.H.G.S.X.
0.4464.10.971620727_atCF202620.1--2e-11At3g1460060S ribosomal protein L18A (RPL18aC)O.I.H.G.S.X.
0.2734.00.961621433_s_atCD801322hypothetical protein LOC100265528-2e-64At5g0296040S ribosomal protein S23 (RPS23B)O.I.H.G.S.X.
0.1313.30.961607676_atCB983117hypothetical protein LOC100262709-4e-6At5g10020leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.996.6GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.595.7GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.793.0GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.390.7GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO
2.289.9GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.189.1GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
1.886.0GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
1.784.7GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.784.7GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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