Co-expression analysis

Gene ID	1621842_at
Gene name	hypothetical protein LOC100256561
Homology with Arabidopsis	Similar to At3g02420: unknown protein (HF=3e-33)
Module size	6 genes
NF	0.68
%ile	93.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	0.99	1621842_at	CB968661	hypothetical protein LOC100256561	-	3e-33	At3g02420	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.99	1622541_at	CB342787	hypothetical protein LOC100258249	-	4e-35	At5g12190	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1618114_s_at	CB915270	hypothetical protein LOC100243282	-	6e-1	At1g27610	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1622362_at	CD802017	hypothetical protein LOC100254265	-	6e-34	At2g25760	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.99	1616070_at	BQ798090	hypothetical protein LOC100242617	-	3e-111	At2g27600	SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.99	1620482_at	CF415268	hypothetical protein LOC100255975	-	1e+0	At1g28510	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	96.6	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
3.6	96.0	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.8	93.4	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.7	93.0	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.5	91.9	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.4	91.3	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.4	91.3	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.3	90.7	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
2.3	90.7	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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