Co-expression analysis

Gene ID 1621836_at
Gene name MADS-box protein 5
Homology with ArabidopsisSimilar to At4g09960: STK (SEEDSTICK) (HF=2e-9)
Module size 19 genes
NF 0.80
%ile 98.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6585.00.941621836_atAF373604.1MADS-box protein 5-2e-9At4g09960STK (SEEDSTICK)O.I.H.G.S.X.
0.9299.00.971610616_atCB921212hypothetical protein LOC100260773 /// hypothetical protein LOC100252365-5e-3At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)O.I.H.G.S.X.
0.9095.60.971611173_atCB979091hypothetical protein LOC100258969-1e+0At3g25080unknown proteinO.I.H.G.S.X.
0.9095.60.971614697_atCB346214hypothetical protein LOC100255962-5e+0At5g07550GRP19 (GLYCINE-RICH PROTEIN 19)O.I.H.G.S.X.
0.8895.40.971614771_atCB346222hypothetical protein LOC100242179-1e+0At5g62200embryo-specific protein-relatedO.I.H.G.S.X.
0.8795.20.971615925_atBQ793198hypothetical protein LOC100260124-3e-4At4g10020AtHSD5 (hydroxysteroid dehydrogenase 5)O.I.H.G.S.X.
0.8594.90.961621346_atCB978597hypothetical protein LOC100263108-8e-2At1g74440unknown proteinO.I.H.G.S.X.
0.8594.90.971613191_atCB348359hypothetical protein LOC100254511-8e-2At3g20850proline-rich family proteinO.I.H.G.S.X.
0.8394.60.971620307_atCB348708hypothetical protein LOC100264814-2e-10At2g33380RD20 (RESPONSIVE TO DESSICATION 20)O.I.H.G.S.X.
0.8193.70.961617980_atCB346475--8e-1At5g66800unknown proteinO.I.H.G.S.X.
0.8093.60.961620137_s_atCB911784hypothetical protein LOC100260466-3e+0At3g20510unknown proteinO.I.H.G.S.X.
0.7792.30.961618312_atCB976210hypothetical protein LOC100240958-8e-2At1g22540proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.7691.50.971619031_atCB976670hypothetical protein LOC100266074-5e-10At3g63140CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA)O.I.H.G.S.X.
0.7691.50.961613161_atBQ792976hypothetical protein LOC100257921-3e+0At4g18860unknown proteinO.I.H.G.S.X.
0.7289.70.961621723_atCA817798hypothetical protein LOC100248744-6e-14At1g61110anac025 (Arabidopsis NAC domain containing protein 25)O.I.H.G.S.X.
0.7289.70.971622225_atBQ793105hypothetical protein LOC100249321-3e+0At3g07425unknown proteinO.I.H.G.S.X.
0.6585.00.981619180_atCB976469hypothetical protein LOC100252897-2e-14At1g17810BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)O.I.H.G.S.X.
0.6384.30.971621786_atCB914345hypothetical protein LOC100249921-2e-3At5g67490unknown proteinO.I.H.G.S.X.
0.5679.40.971619481_atCB348820hypothetical protein LOC100256947-2e-2At4g25140OLEO1 (OLEOSIN 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM436373Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.886.0GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.784.7GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
1.683.3GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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