Co-expression analysis

Gene ID	1621834_at
Gene name	hypothetical protein LOC100254175
Homology with Arabidopsis	Similar to At3g02600: LPP3 (LIPID PHOSPHATE PHOSPHATASE 3) (HF=2e-5)
Module size	6 genes
NF	0.16
%ile	24.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	75.2	0.95	1621834_at	BQ794561	hypothetical protein LOC100254175	-	2e-5	At3g02600	LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.95	1611787_at	BQ793628	similar to C2 domain-containing protein / GRAM domain-containing protein	-	3e+0	At4g16141	sequence-specific DNA binding / transcription factor/ zinc ion binding	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.96	1612132_s_at	CB341731	hypothetical protein LOC100254745	-	2e-2	At1g22280	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.96	1614801_at	CB978647	hypothetical protein LOC100250155	-	1e-3	At3g58570	DEAD box RNA helicase, putative	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.95	1618140_at	CB981704	similar to putative L19 ribosomal protein	-	3e-30	At4g11630	ribosomal protein L19 family protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.95	1619420_at	CF403238	hypothetical protein LOC100260711	-	2e+0	At3g26870	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	97.5	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.2	97.1	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
3.9	96.6	GSM147684	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	13
3.3	95.2	GSM147697	Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation	26
3.3	95.2	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.2	89.9	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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