Co-expression analysis

Gene ID	1621827_at
Gene name	similar to flowering locus C-like MADS-box protein
Homology with Arabidopsis	Similar to At2g45650: AGL6 (AGAMOUS-LIKE 6) (HF=4e-11)
Module size	8 genes
NF	0.28
%ile	39.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.9	0.95	1621827_at	CF373383	similar to flowering locus C-like MADS-box protein	-	4e-11	At2g45650	AGL6 (AGAMOUS-LIKE 6)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.96	1621497_at	CB971307	hypothetical protein LOC100242262	-	2e-3	At1g72770	HAB1 (HOMOLOGY TO ABI1)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.96	1619312_a_at	CD801019	hypothetical protein LOC100255878 /// hypothetical protein LOC100245575	-	2e-75	At4g37550	formamidase, putative / formamide amidohydrolase, putative	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.96	1621407_at	CD801019	hypothetical protein LOC100255878	-	2e-75	At4g37550	formamidase, putative / formamide amidohydrolase, putative	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.96	1615467_at	CF511291	hypothetical protein LOC100245445	-	1e-13	At1g75700	HVA22G (HVA22-LIKE PROTEIN G)	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.96	1619954_at	CB974333	hypothetical protein LOC100257028	-	7e-16	At5g07830	AtGUS2 (Arabidopsis thaliana glucuronidase 2)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.96	1614963_at	CF210984	hypothetical protein LOC100266167	-	8e-12	At1g01950	armadillo/beta-catenin repeat family protein / kinesin motor family protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.96	1619654_at	CF415234	hypothetical protein LOC100261504	-	2e-12	At5g19290	esterase/lipase/thioesterase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	96.6	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
3.5	95.7	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
3.4	95.5	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.1	94.6	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
3.0	94.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.8	93.4	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.8	93.4	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.7	93.0	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.6	92.5	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.5	91.9	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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