Co-expression analysis

Gene ID	1621815_at
Gene name	hypothetical protein LOC100261110
Homology with Arabidopsis	Similar to At1g12630: DNA binding / transcription activator/ transcription factor (HF=1e+0)
Module size	7 genes
NF	0.68
%ile	93.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.96	1621815_at	CF213959	hypothetical protein LOC100261110	-	1e+0	At1g12630	DNA binding / transcription activator/ transcription factor	O.I.	H.G.	S.X.	Please select
0.86	95.1	0.96	1618654_at	CF513468	hypothetical protein LOC100259649	-	9e-1	At4g04614	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1619789_at	CF608880	hypothetical protein LOC100244542	-	4e+0	At2g26040	Bet v I allergen family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1607019_at	CB922746	hypothetical protein LOC100251940	-	3e+0	At2g41420	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.96	1622561_at	CF513450	hypothetical protein LOC100264847	-	6e+0	Atmg00620	-	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.96	1619323_at	CF413821	hypothetical protein LOC100264304	-	7e+0	At5g37780	CAM1 (CALMODULIN 1)	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.96	1617668_at	CF514659	hypothetical protein LOC100243346	-	5e-4	At4g11080	high mobility group (HMG1/2) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.1	99.1	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.3	97.2	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.1	96.9	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.8	96.4	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.7	96.2	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.6	96.0	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.2	94.9	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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