Co-expression analysis

Gene ID	1621798_at
Gene name
Homology with Arabidopsis	Similar to At5g65510: AIL7 (AINTEGUMENTA-like 7) (HF=1e-3)
Module size	43 genes
NF	0.25
%ile	34.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.97	99.9	0.95	1621798_at	CF203395.1	-	-	1e-3	At5g65510	AIL7 (AINTEGUMENTA-like 7)	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.96	1611597_at	CB918250	hypothetical protein LOC100252439	-	1e-1	At1g51650	ATP synthase epsilon chain, mitochondrial	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.97	1618057_at	CF207962	hypothetical protein LOC100265221	-	4e+0	At5g49410	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.97	1619403_at	CF211963	hypothetical protein LOC100263522	-	1e+0	At3g52400	SYP122 (SYNTAXIN OF PLANTS 122)	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.96	1612828_at	BQ799707	hypothetical protein LOC100241128	-	3e-14	At3g60340	palmitoyl protein thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.96	1612930_at	CB975986	hypothetical protein LOC100255839	-	6e-7	At4g25570	ACYB-2	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.97	1612192_s_at	CF518716	similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase	-	8e-86	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1622610_at	CF413855	hypothetical protein LOC100264665	-	5e-6	At5g15090	VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1617299_at	CD801559	hypothetical protein LOC100249941	-	3e-31	At2g46225	ABIL1 (Abi-1-like 1)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1615704_at	CB970180	hypothetical protein LOC100253600	-	9e-5	At3g22180	zinc finger (DHHC type) family protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.96	1606787_at	CF373239	hypothetical protein LOC100258674	-	4e-1	At1g13620	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.97	1616367_x_at	CF201916.1	-	-	4e-10	At5g13030	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.96	1622222_at	CF513193	hypothetical LOC100241693	-	2e-4	At5g15630	IRX6	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.97	1616536_at	CF608264	hypothetical protein LOC100249974	-	1e-10	At3g08020	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.97	1621053_at	CF414284	hypothetical protein LOC100258640	-	1e-9	At1g66430	pfkB-type carbohydrate kinase family protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.97	1614475_at	CF609346	hypothetical protein LOC100263178	-	9e-18	At5g43930	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.95	1619496_at	CF372656	hypothetical LOC100265165	-	1e-1	At4g17950	DNA-binding family protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.96	1618609_s_at	BQ800563	hypothetical protein LOC100249094	-	1e+0	At4g28556	RIC7	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.97	1608735_at	CF605804	-	-	3e+0	At5g41960	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.96	1615216_at	CB005624	hypothetical protein LOC100240861	-	6e-34	At3g63410	APG1 (ALBINO OR PALE GREEN MUTANT 1)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.97	1612776_at	CF413964	-	-	2e-1	At1g05300	ZIP5	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.97	1620836_at	BQ794337	hypothetical protein LOC100260803	-	1e-6	At1g32500	ATNAP6 (NON-INTRINSIC ABC PROTEIN 6)	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.97	1616237_s_at	BQ792111	hypothetical protein LOC100253030	-	7e-5	At4g23420	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.97	1609640_at	CF513267	hypothetical protein LOC100244109	-	7e-24	At5g11340	GCN5-related N-acetyltransferase (GNAT) family protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.96	1606658_at	CB981496	hypothetical protein LOC100242421 /// hypothetical protein LOC100249803	-	5e-26	At2g22870	EMB2001 (embryo defective 2001)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.97	1612084_s_at	BQ795572	-	-	1e+0	At1g27740	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.97	1622519_at	CF215214	hypothetical protein LOC100253962	-	2e-8	At5g47390	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.97	1607335_at	CD801694	hypothetical protein LOC100245908	-	1e-20	At3g06050	PRXIIF (PEROXIREDOXIN IIF)	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.96	1616615_at	CD801972	hypothetical protein LOC100268085	-	3e-39	At2g44040	dihydrodipicolinate reductase family protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.97	1607608_at	CD801551	hypothetical protein LOC100251222	-	3e-1	At5g58800	quinone reductase family protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.97	1615906_at	CF208812	hypothetical protein LOC100248563	-	3e-3	At2g47410	nucleotide binding	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.98	1622186_at	CF209012	hypothetical protein LOC100247647	-	4e+0	At3g50550	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.96	1619272_at	CF373376	hypothetical protein LOC100265908	-	1e-4	At1g29395	COR414-TM1	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.97	1616653_at	CD801851	hypothetical protein LOC100259387	-	2e-15	At5g50870	UBC27 (ubiquitin-conjugating enzyme 27)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.96	1612032_at	BQ797311	hypothetical protein LOC100251875	-	3e-1	At2g20208	LCR60 (Low-molecular-weight cysteine-rich 60)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.95	1616023_at	CB979152	hypothetical protein LOC100252512	-	1e-38	At1g50140	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.97	1620532_at	CB004638	hypothetical protein LOC100240981	-	2e-43	At5g13610	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.97	1611911_at	CF212492	hypothetical protein LOC100266461	-	1e-121	At5g08530	CI51 (51 kDa subunit of complex I)	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.96	1614537_at	CB919204	hypothetical protein LOC100266511	-	1e-31	At3g06310	NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.97	1607160_at	CF212790	hypothetical protein LOC100241076	-	3e-4	At1g60830	U2 snRNP auxiliary factor large subunit, putative	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.98	1608788_at	CF414358	hypothetical protein LOC100244969	-	2e-5	At5g65250	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.96	1617773_at	CB978900	hypothetical protein LOC100245942	-	1e+0	At2g47060	serine/threonine protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.96	1622812_at	CF516709	similar to SAB	-	1e+0	At2g35470	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.0	88.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.6	83.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
1.6	83.3	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
1.6	83.3	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
1.5	81.7	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.5	81.7	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
1.5	81.7	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
1.5	81.7	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.5	81.7	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.5	81.7	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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