Co-expression analysis

Gene ID 1621785_at
Gene name hypothetical protein LOC100242004
Homology with ArabidopsisSimilar to At2g44610: RAB6A (HF=2e-101)
Module size 6 genes
NF 0.45
%ile 67.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.981621785_atCF213480hypothetical protein LOC100242004-2e-101At2g44610RAB6AO.I.H.G.S.X.
0.5375.20.981615717_s_atCB978762hypothetical protein LOC100252829-7e-71At1g04760ATVAMP726O.I.H.G.S.X.
0.5072.70.991608040_atCF515269hypothetical protein LOC100264739-1e+0At2g36026-O.I.H.G.S.X.
0.5072.70.991616979_s_atCD711896hypothetical protein LOC100262599-1e-63At1g75440UBC16 (ubiquitin-conjugating enzyme 16)O.I.H.G.S.X.
0.4361.50.991620975_atBQ798236hypothetical protein LOC100258366-7e-55At1g11890SEC22O.I.H.G.S.X.
0.1616.70.991612977_atCF204464.1hypothetical protein LOC100266745-5e-53At3g60250CKB3O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.398.8GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.597.5GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
3.796.2GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM436417V. riparia (VR, PI588259) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436392V. riparia (VR, PI588259) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.390.7GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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