Co-expression analysis

Gene ID 1621782_at
Gene name hypothetical protein LOC100265088
Homology with ArabidopsisSimilar to At5g08080: SYP132 (SYNTAXIN OF PLANTS 132) (HF=1e-15)
Module size 9 genes
NF 0.26
%ile 36.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.971621782_atCD802296hypothetical protein LOC100265088-1e-15At5g08080SYP132 (SYNTAXIN OF PLANTS 132)O.I.H.G.S.X.
0.5375.20.981620602_atBQ796987hypothetical protein LOC100250131-2e-47At5g01960zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3345.70.981617376_atBQ792638hypothetical protein LOC100250911-2e-3At4g12760unknown proteinO.I.H.G.S.X.
0.3345.70.981610393_atCD798664hypothetical protein LOC100265545-4e-12At3g11400eukaryotic translation initiation factor 3G / eIF3gO.I.H.G.S.X.
0.2937.70.981616979_s_atCD711896hypothetical protein LOC100262599-1e-63At1g75440UBC16 (ubiquitin-conjugating enzyme 16)O.I.H.G.S.X.
0.2734.00.981612407_atCF415099hypothetical protein LOC100248505-1e-14At1g26670VTI1BO.I.H.G.S.X.
0.2632.00.981615717_s_atCB978762hypothetical protein LOC100252829-7e-71At1g04760ATVAMP726O.I.H.G.S.X.
0.1819.40.981613693_atBQ796396hypothetical LOC100255479-8e-22At2g18600RUB1-conjugating enzyme, putativeO.I.H.G.S.X.
0.1111.30.981618760_atCF511611hypothetical protein LOC100268141-1e+0At2g03310unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
3.696.0GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.793.0GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.793.0GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.692.5GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
2.591.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.591.9GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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