Co-expression analysis

Gene ID	1621782_at
Gene name	hypothetical protein LOC100265088
Homology with Arabidopsis	Similar to At5g08080: SYP132 (SYNTAXIN OF PLANTS 132) (HF=1e-15)
Module size	9 genes
NF	0.26
%ile	36.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.97	1621782_at	CD802296	hypothetical protein LOC100265088	-	1e-15	At5g08080	SYP132 (SYNTAXIN OF PLANTS 132)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1620602_at	BQ796987	hypothetical protein LOC100250131	-	2e-47	At5g01960	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1617376_at	BQ792638	hypothetical protein LOC100250911	-	2e-3	At4g12760	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1610393_at	CD798664	hypothetical protein LOC100265545	-	4e-12	At3g11400	eukaryotic translation initiation factor 3G / eIF3g	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.98	1616979_s_at	CD711896	hypothetical protein LOC100262599	-	1e-63	At1g75440	UBC16 (ubiquitin-conjugating enzyme 16)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1612407_at	CF415099	hypothetical protein LOC100248505	-	1e-14	At1g26670	VTI1B	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.98	1615717_s_at	CB978762	hypothetical protein LOC100252829	-	7e-71	At1g04760	ATVAMP726	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.98	1613693_at	BQ796396	hypothetical LOC100255479	-	8e-22	At2g18600	RUB1-conjugating enzyme, putative	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.98	1618760_at	CF511611	hypothetical protein LOC100268141	-	1e+0	At2g03310	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.6	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.6	96.0	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.7	93.0	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.7	93.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.6	92.5	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.5	91.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.5	91.9	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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