Co-expression analysis

Gene ID 1621779_s_at
Gene name hypothetical protein LOC100244148
Homology with ArabidopsisSimilar to At3g52560: UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4) (HF=6e-40)
Module size 8 genes
NF 0.55
%ile 81.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.991621779_s_atBQ794980hypothetical protein LOC100244148-6e-40At3g52560UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4)O.I.H.G.S.X.
0.6384.30.991608813_s_atBQ795140hypothetical protein LOC100255523-5e-84At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.H.G.S.X.
0.5779.80.991606718_atCA817648hypothetical protein LOC100254624-2e-93At5g17060ATARFB1BO.I.H.G.S.X.
0.5375.20.991609424_atCD798745hypothetical protein LOC100263956-7e-30At3g13670protein kinase family proteinO.I.H.G.S.X.
0.5072.70.991620693_atCF513433--1e-12At2g22730transporter-relatedO.I.H.G.S.X.
0.5072.70.991614112_atBQ797230hypothetical protein LOC100252349-3e-11At5g42190ASK2 (ARABIDOPSIS SKP1-LIKE 2)O.I.H.G.S.X.
0.4767.70.991617406_s_atCF415339hypothetical protein LOC100266010-2e-8At3g07220transcriptional activator, putativeO.I.H.G.S.X.
0.3954.90.991622424_atCA813635hypothetical protein LOC100265980-9e-11At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.993.8GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.893.4GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.793.0GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.692.5GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.390.7GSM147713Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation42Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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