Co-expression analysis

Gene ID 1621771_at
Gene name 40S ribosomal protein SA
Homology with ArabidopsisSimilar to At1g72370: P40 (HF=1e-110)
Module size 6 genes
NF 0.38
%ile 55.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.991621771_atCB34852240S ribosomal protein SA-1e-110At1g72370P40O.I.H.G.S.X.
0.5577.30.991621806_atCF513282hypothetical protein LOC100265511-1e-13At2g4051040S ribosomal protein S26 (RPS26A)O.I.H.G.S.X.
0.5072.70.991606468_atCB346057hypothetical protein LOC100256800-6e-25At5g2785060S ribosomal protein L18 (RPL18C)O.I.H.G.S.X.
0.4057.70.991608953_atBQ797089hypothetical protein LOC100249027-5e-19At1g18080ATARCAO.I.H.G.S.X.
0.2428.70.991613860_s_atCF512506cyc07-6e-38At3g0484040S ribosomal protein S3A (RPS3aA)O.I.H.G.S.X.
0.2225.60.981616231_s_atCB970587hypothetical protein LOC100243340-1e-19At4g2574040S ribosomal protein S10 (RPS10A)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.099.8GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.696.0GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
3.696.0GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
3.595.7GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
3.595.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
3.595.7GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
3.595.7GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
3.495.5GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
3.495.5GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
3.294.9GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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