Co-expression analysis

Gene ID 1621750_at
Gene name
Homology with ArabidopsisSimilar to At5g59050: unknown protein (HF=2e-1)
Module size 6 genes
NF 0.04
%ile 9.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.721621750_atCB971067--2e-1At5g59050unknown proteinO.I.H.G.S.X.
0.3141.30.951610404_x_atCF205541.1--2e-1At4g19270unknown proteinO.I.H.G.S.X.
0.088.50.951614351_atBQ795124--1e-13At3g53110LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)O.I.H.G.S.X.
0.034.20.951614203_atCF518409hypothetical protein LOC100266138-2e-6At1g19860zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.023.20.961608449_atCB349956hypothetical protein LOC100247109-6e-72At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)O.I.H.G.S.X.
0.023.20.901617327_atCD720993--3e-20At1g55350DEK1 (DEFECTIVE KERNEL 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.893.4GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.591.9GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.390.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.289.9GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.289.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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