Co-expression analysis

Gene ID 1621741_at
Gene name hypothetical protein LOC100247891
Homology with ArabidopsisSimilar to At2g05140: phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein (HF=4e-1)
Module size 7 genes
NF 0.18
%ile 26.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.971621741_atCF518837hypothetical protein LOC100247891-4e-1At2g05140phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family proteinO.I.H.G.S.X.
0.4464.10.971611619_atCB968961similar to putative GTPase activating protein-4e-3At3g07940zinc finger and C2 domain protein, putativeO.I.H.G.S.X.
0.2225.60.971613915_s_atCA810703hypothetical protein LOC100263937-7e-90At4g24740AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 2)O.I.H.G.S.X.
0.1515.60.971612309_atCB342376hypothetical protein LOC100245361 /// hypothetical protein LOC100263480-7e-2At2g37195unknown proteinO.I.H.G.S.X.
0.1010.30.971611250_atCB922487hypothetical protein LOC100249628-9e-4At4g24100protein kinase family proteinO.I.H.G.S.X.
0.1010.30.971615754_atCF213398--3e-41At5g65470unknown proteinO.I.H.G.S.X.
0.099.40.971619905_atCF404235hypothetical protein LOC100263242-2e-1At2g34160nucleic acid bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.289.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.289.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.189.1GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.189.1GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.088.2GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.088.2GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
2.088.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.088.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.088.2GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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