Co-expression analysis

Gene ID 1621736_at
Gene name hypothetical protein LOC100247202
Homology with ArabidopsisSimilar to At3g08950: electron transport SCO1/SenC family protein (HF=1e-9)
Module size 8 genes
NF 0.11
%ile 18.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7892.60.971621736_atCB971719hypothetical protein LOC100247202-1e-9At3g08950electron transport SCO1/SenC family proteinO.I.H.G.S.X.
0.5072.70.971621877_atCB922518hypothetical protein LOC100241998-6e-6At3g4459060S acidic ribosomal protein P2 (RPP2D)O.I.H.G.S.X.
0.3548.50.971615586_s_atCF207487hypothetical protein LOC100260303-1e-32At3g55830EPC1 (ECTOPICALLY PARTING CELLS)O.I.H.G.S.X.
0.2837.70.971608024_atCF405656hypothetical protein LOC100263017-2e-1At3g28490oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.2225.60.981608167_s_atCF414860hypothetical protein LOC100252467-4e-34At5g5667040S ribosomal protein S30 (RPS30C)O.I.H.G.S.X.
0.077.80.981617246_s_atCF514982similar to 40S ribosomal S4 protein-5e-94At5g0709040S ribosomal protein S4 (RPS4B)O.I.H.G.S.X.
0.056.00.981613700_atCD717961hypothetical protein LOC100243012-3e-29At5g23290PDF5 (PREFOLDIN 5)O.I.H.G.S.X.
0.034.20.971620980_s_atCF209157hypothetical protein LOC100255909-7e-6At1g14685BPC2 (BASIC PENTACYSTEINE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.196.9GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM147706Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation35Link to GEO
2.692.5GSM147702Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation31Link to GEO
2.289.9GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436392V. riparia (VR, PI588259) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436361Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436379Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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