Co-expression analysis

Gene ID 1621721_at
Gene name hypothetical protein LOC100248049
Homology with ArabidopsisSimilar to At5g08320: unknown protein (HF=3e-17)
Module size 6 genes
NF 0.35
%ile 50.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.981621721_atCD718881hypothetical protein LOC100248049-3e-17At5g08320unknown proteinO.I.H.G.S.X.
0.5375.20.971609562_atCF210167hypothetical protein LOC100255509-5e-52At2g21150XCT (XAP5 CIRCADIAN TIMEKEEPER)O.I.H.G.S.X.
0.3345.70.971615553_atCD800674hypothetical protein LOC100261677-3e+0At2g20690lumazine-binding family proteinO.I.H.G.S.X.
0.2530.50.971618446_atCB969242hypothetical protein LOC100253086-1e-85At5g63890ATHDH (HISTIDINOL DEHYDROGENASE)O.I.H.G.S.X.
0.2327.50.981613735_atCF209024hypothetical protein LOC100264792-4e-64At2g3273026S proteasome regulatory subunit, putativeO.I.H.G.S.X.
0.2022.40.981607682_s_atCF213778hypothetical protein LOC100243930-1e-9At5g19980integral membrane family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.2100.0GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.796.2GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
3.094.2GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO
2.993.8GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.893.4GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.893.4GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.793.0GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
2.793.0GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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