Co-expression analysis

Gene ID	1621718_at
Gene name	hypothetical protein LOC100244137
Homology with Arabidopsis	Similar to At2g25940: ALPHA-VPE (alpha-vacuolar processing enzyme) (HF=5e-26)
Module size	6 genes
NF	0.25
%ile	35.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.6	0.98	1621718_at	BQ794503	hypothetical protein LOC100244137	-	5e-26	At2g25940	ALPHA-VPE (alpha-vacuolar processing enzyme)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1617742_at	CA817105	hypothetical protein LOC100255734	-	4e-2	At5g39910	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.98	1610485_a_at	CF207352	hypothetical protein LOC100263653	-	1e+0	At4g02980	ABP1 (ENDOPLASMIC RETICULUM AUXIN BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1609472_at	CB349683	hypothetical protein LOC100261641	-	4e-8	At3g03790	ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.98	1614181_at	CB340606	hypothetical protein LOC100263351	-	1e-1	At1g34320	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.98	1607940_at	BQ800262	hypothetical protein LOC100261463	-	6e-1	At1g69470	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.7	GSM436424	V. riparia (VR, PI588259) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436422	V. riparia (VR, PI588259) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436421	V. riparia (VR, PI588259) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.7	93.0	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.6	92.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.6	92.5	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.5	91.9	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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