Co-expression analysis

Gene ID	1621710_at
Gene name
Homology with Arabidopsis	Similar to At1g59690: - (HF=3e-1)
Module size	6 genes
NF	0.43
%ile	64.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.96	1621710_at	CF201680.1	-	-	3e-1	At1g59690	-	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.95	1621079_at	CF202060.1	-	-	3e-51	At3g14290	PAE2	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1617825_s_at	CF205420.1	-	-	3e-23	At1g15880	GOS11 (golgi snare 11)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1607369_at	CF213621	-	-	1e-3	At1g26940	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.96	1610463_at	CF204701.1	hypothetical protein LOC100246159	-	1e-53	At4g17390	60S ribosomal protein L15 (RPL15B)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.96	1613156_at	CF209286	hypothetical protein LOC100247989	-	6e-5	At1g53400	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.1	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.1	96.9	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.7	96.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.4	95.5	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.3	95.2	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.3	95.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.2	94.9	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
3.2	94.9	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.9	93.8	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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