Co-expression analysis

Gene ID 1621699_at
Gene name hypothetical protein LOC100248753
Homology with ArabidopsisSimilar to At5g09260: VPS20.2 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2) (HF=2e-35)
Module size 7 genes
NF 0.60
%ile 86.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7591.30.981621699_atCF212982hypothetical protein LOC100248753-2e-35At5g09260VPS20.2 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2)O.I.H.G.S.X.
0.6384.30.981609816_atCF514960hypothetical protein LOC100264261-2e-6At5g08560transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.6183.20.991618198_atCB007829hypothetical protein LOC100242410-3e-1At1g51200zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.5679.40.981609751_atCA817020hypothetical protein LOC100253636-5e-51At5g18520-O.I.H.G.S.X.
0.5375.20.991616458_s_atCF515510hypothetical protein LOC100256310-1e-1At3g43910unknown proteinO.I.H.G.S.X.
0.4767.70.991607134_atBQ794051hypothetical protein LOC100243531-2e+0At3g51100unknown proteinO.I.H.G.S.X.
0.4666.50.981611513_s_atCF414212hypothetical protein LOC100262157-2e-1At3g49950scarecrow transcription factor family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.395.2GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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