Co-expression analysis

Gene ID	1621698_at
Gene name	similar to bHLH transcription factor Upa20
Homology with Arabidopsis	Similar to At3g20510: unknown protein (HF=8e-2)
Module size	6 genes
NF	0.72
%ile	95.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.99	1621698_at	BQ796130	similar to bHLH transcription factor Upa20	-	8e-2	At3g20510	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	98.8	0.98	1619493_at	CB976133	hypothetical protein LOC100251016	-	2e-30	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1611979_at	CB979128	hypothetical protein LOC100251016	-	1e-31	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.98	1610418_at	BQ798078	hypothetical protein LOC100245385	-	8e-13	At1g20190	ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.98	1615212_at	CF406027	ripening-related protein-like	-	8e+0	At5g64040	PSAN	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1611561_a_at	CD800254	hypothetical protein LOC100240998	-	2e-2	At4g36850	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.8	93.4	GSM436403	V. riparia (VR, PI588259) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436401	V. riparia (VR, PI588259) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436376	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436400	V. riparia (VR, PI588259) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436402	V. riparia (VR, PI588259) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
2.3	90.7	GSM436418	V. riparia (VR, PI588259) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.2	89.9	GSM436405	V. riparia (VR, PI588259) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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