Co-expression analysis

Gene ID	1621693_at
Gene name	hypothetical protein LOC100248963
Homology with Arabidopsis	Similar to At1g75380: wound-responsive protein-related (HF=5e-73)
Module size	6 genes
NF	0.68
%ile	93.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.94	1621693_at	BQ792185	hypothetical protein LOC100248963	-	5e-73	At1g75380	wound-responsive protein-related	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.93	1614496_at	CD797586	hypothetical protein LOC100259281	-	9e-8	At1g80570	F-box family protein (FBL14)	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.95	1616671_at	CF373738	hypothetical protein LOC100250156	-	2e-20	At3g32930	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.92	1607583_at	CA810758	hypothetical protein LOC100264001	-	6e-2	At5g49700	DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.94	1621329_at	CF607644	-	-	1e+0	At2g21660	CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.93	1613168_at	CB971028	hypothetical protein LOC100257704	-	4e-42	At1g29880	glycyl-tRNA synthetase / glycine--tRNA ligase	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.2	99.6	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
8.7	99.5	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.6	97.6	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.9	96.6	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.7	96.2	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436424	V. riparia (VR, PI588259) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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