Co-expression analysis

Gene ID	1621652_at
Gene name	hypothetical protein LOC100262206
Homology with Arabidopsis	Similar to At5g59720: HSP18.2 (heat shock protein 18.2) (HF=6e-9)
Module size	6 genes
NF	0.72
%ile	95.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.80	1621652_at	CF518056	hypothetical protein LOC100262206	-	6e-9	At5g59720	HSP18.2 (heat shock protein 18.2)	O.I.	H.G.	S.X.	Please select
0.91	98.8	0.85	1609222_at	CF518991	hypothetical protein LOC100263588	-	5e-9	At4g10250	ATHSP22.0	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.85	1614614_at	CB910349	hypothetical protein LOC100256846	-	2e-2	At2g46240	BAG6 (BCL-2-ASSOCIATED ATHANOGENE 6)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.85	1611192_at	CB348409	hypothetical protein LOC100268056	-	5e-10	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.85	1616145_a_at	BQ794473	hypothetical protein LOC100261583	-	1e-3	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.86	1620960_a_at	CF515315	hypothetical protein LOC100253085 /// hypothetical protein LOC100263355	-	6e-3	At3g46230	ATHSP17.4	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	98.2	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.8	97.8	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.2	97.1	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.1	96.9	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.1	96.9	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.0	96.7	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.6	96.0	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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