Co-expression analysis

Gene ID	1621612_at
Gene name	hypothetical protein LOC100243970
Homology with Arabidopsis	Similar to At1g52150: ATHB-15 (HF=3e-36)
Module size	6 genes
NF	0.21
%ile	30.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	77.3	0.95	1621612_at	CB969908	hypothetical protein LOC100243970	-	3e-36	At1g52150	ATHB-15	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.96	1606472_at	CB979487	-	-	8e-21	At3g29390	RIK (RS2-Interacting KH protein)	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.95	1616547_at	BQ798895	hypothetical protein LOC100256265	-	5e-21	At5g23230	NIC2 (NICOTINAMIDASE 2)	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.95	1614590_at	CF515824	-	-	1e-7	At2g39290	PGP1 (PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 1)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.95	1616793_at	CD720210	-	-	1e+0	At5g26070	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.95	1615211_at	BQ797462	hypothetical protein LOC100267901	-	3e-8	At2g26280	CID7	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.2	89.9	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.8	86.0	GSM436353	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
1.8	86.0	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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