Co-expression analysis

Gene ID	1621584_at
Gene name
Homology with Arabidopsis	Similar to At2g33870: ArRABA1h (Arabidopsis Rab GTPase homolog A1h) (HF=2e+0)
Module size	6 genes
NF	0.08
%ile	15.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.94	1621584_at	CF203397.1	-	-	2e+0	At2g33870	ArRABA1h (Arabidopsis Rab GTPase homolog A1h)	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.95	1617132_at	CF206145.1	-	-	5e+0	At5g60290	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.95	1621260_at	BQ797265	-	-	3e-1	At4g30630	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.95	1619334_at	CF518775	hypothetical protein LOC100246179	-	2e-13	At3g50650	scarecrow-like transcription factor 7 (SCL7)	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.95	1616416_at	CB349840	hypothetical protein LOC100251243	-	7e+0	At3g43740	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.95	1606496_at	CB979201	-	-	1e+0	At3g47410	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.4	91.3	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.2	89.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.1	89.1	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
1.8	86.0	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.8	86.0	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
1.7	84.7	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
1.7	84.7	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.7	84.7	GSM287884	Green soft berry C7 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.7	84.7	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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