Co-expression analysis

Gene ID 1621583_at
Gene name hypothetical protein LOC100266937
Homology with ArabidopsisSimilar to At1g05850: POM1 (POM-POM1) (HF=3e-12)
Module size 7 genes
NF 0.27
%ile 37.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.981621583_atCF404733hypothetical protein LOC100266937-3e-12At1g05850POM1 (POM-POM1)O.I.H.G.S.X.
0.5779.80.981607507_atCF415695hypothetical protein LOC100265985-5e-3At3g61050NTMC2T4O.I.H.G.S.X.
0.2632.00.981612995_atCD012259--4e-18At3g13340WD-40 repeat family proteinO.I.H.G.S.X.
0.2632.00.981619289_atCB340785hypothetical protein LOC100242328-1e+0At4g16265NRPB9BO.I.H.G.S.X.
0.2530.50.981613930_atCF213897hypothetical protein LOC100259771-4e-85At5g21070unknown proteinO.I.H.G.S.X.
0.1616.70.981616981_atCB971105phospholipase D alpha-4e-52At3g15730PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1)O.I.H.G.S.X.
0.1515.60.981616840_atCF608637hypothetical protein LOC100255499-9e-15At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM147678Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation7Link to GEO
2.793.0GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.189.1GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM436415V. riparia (VR, PI588259) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.088.2GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.088.2GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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