Co-expression analysis

Gene ID	1621574_at
Gene name	hypothetical protein LOC100241803
Homology with Arabidopsis	Similar to At5g28290: ATNEK3 (NIMA-RELATED KINASE3) (HF=3e-2)
Module size	7 genes
NF	0.56
%ile	82.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.96	1621574_at	CF511059	hypothetical protein LOC100241803	-	3e-2	At5g28290	ATNEK3 (NIMA-RELATED KINASE3)	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.96	1619847_at	CF514271	hypothetical protein LOC100261336	-	1e+0	At3g22780	TSO1 (CHINESE FOR 'UGLY')	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1608574_at	CF414345	hypothetical protein LOC100249220	-	6e-2	At3g63095	-	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.97	1620600_at	CF373014	hypothetical protein LOC100258054	-	4e+0	At3g26800	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1618801_at	CF208981	-	-	8e-3	At5g48500	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1611168_at	CF208285	hypothetical protein LOC100247366	-	2e-139	At1g50010	TUA2	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.97	1616611_at	CF404283	-	-	2e-1	At2g33220	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
2.4	91.3	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.3	90.7	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
1.9	87.2	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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