Co-expression analysis

Gene ID	1621556_s_at
Gene name	hypothetical protein LOC100246330 /// hypothetical protein LOC100266521
Homology with Arabidopsis	Similar to At2g22430: ATHB6 (HF=2e-4)
Module size	6 genes
NF	0.43
%ile	64.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.97	1621556_s_at	CB980317	hypothetical protein LOC100246330 /// hypothetical protein LOC100266521	-	2e-4	At2g22430	ATHB6	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.97	1619464_at	CA818609	hypothetical protein LOC100254564	-	3e-11	At1g79160	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1609974_at	CB977877	hypothetical protein LOC100267017	-	2e-61	At4g26610	D6PKL1 (D6 PROTEIN KINASE LIKE 1)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1612516_at	CB976044	hypothetical protein LOC100252647	-	8e-9	At4g39400	BRI1 (BRASSINOSTEROID INSENSITIVE 1)	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.97	1618184_at	BQ795140	hypothetical protein LOC100255523	-	5e-84	At1g78870	UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.97	1619894_at	CF204831.1	hypothetical protein LOC100244643	-	2e-43	At2g42590	GRF9 (GENERAL REGULATORY FACTOR 9)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.6	96.0	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
2.2	89.9	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
2.0	88.2	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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