Co-expression analysis

Gene ID	1621554_s_at
Gene name	similar to Os03g0670700
Homology with Arabidopsis	Similar to At2g21660: CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2) (HF=4e-6)
Module size	12 genes
NF	0.23
%ile	32.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	84.7	0.94	1621554_s_at	CF511998	similar to Os03g0670700	-	4e-6	At2g21660	CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.95	1616828_s_at	CD799685	similar to Os03g0670700	-	1e+0	At4g38680	GRP2 (GLYCINE RICH PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.97	1611877_at	CF372971	hypothetical protein LOC100247278	-	4e-22	At2g31060	elongation factor family protein	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.96	1620607_s_at	CB910956	hypothetical protein LOC100259713	-	1e-1	At2g47890	zinc finger (B-box type) family protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.96	1621317_at	CF514922	similar to F10B6.22	-	2e-27	At1g14810	semialdehyde dehydrogenase family protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.96	1621720_at	CD801738	hypothetical protein LOC100265034	-	1e-33	At1g45332	mitochondrial elongation factor, putative	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.96	1617932_at	CF511103	hypothetical protein LOC100260043	-	2e-43	At5g51570	band 7 family protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1610570_at	CA807939	hypothetical protein LOC100246879	-	2e-24	At5g24430	calcium-dependent protein kinase, putative / CDPK, putative	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.96	1619908_at	CD798796	hypothetical protein LOC100265022	-	2e-5	At3g55640	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.96	1607477_at	CB968954	hypothetical protein LOC100247294	-	2e-13	At5g66010	RNA binding / nucleic acid binding / nucleotide binding	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.96	1620042_at	CF514775	hypothetical protein LOC100243431	-	3e-76	At2g47390	serine-type endopeptidase/ serine-type peptidase	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.96	1609000_at	CF203971.1	hypothetical protein LOC100264409	-	4e-23	At5g50850	MAB1 (MACCI-BOU)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.2	94.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.1	94.6	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
3.0	94.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.0	94.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.7	93.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.6	92.5	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.5	91.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.4	91.3	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.2	89.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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