Co-expression analysis

Gene ID	1621508_at
Gene name	hypothetical protein LOC100260203
Homology with Arabidopsis	Similar to At5g35180: phosphoinositide binding (HF=3e-20)
Module size	6 genes
NF	0.74
%ile	96.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	0.97	1621508_at	CB005665	hypothetical protein LOC100260203	-	3e-20	At5g35180	phosphoinositide binding	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.97	1610617_at	CB916396	hypothetical protein LOC100258419	-	6e-3	At2g41475	-	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.97	1612181_at	CF518786	hypothetical protein LOC100241990	-	7e-6	At4g14100	transferase, transferring glycosyl groups	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1610742_at	CB008464	similar to acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative	-	1e-20	At5g48230	ACAT2 (ACETOACETYL-COA THIOLASE 2)	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.96	1608878_s_at	CB923323	hypothetical protein LOC100244761	-	2e-3	At2g14560	LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1609101_at	CB921620	hypothetical protein LOC100252214	-	9e-31	At5g34850	PAP26 (PURPLE ACID PHOSPHATASE 26)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.0	96.7	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.3	95.2	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.7	93.0	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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