Co-expression analysis

Gene ID	1621483_at
Gene name	hypothetical protein LOC100254964
Homology with Arabidopsis	Similar to At1g12810: proline-rich family protein (HF=2e-6)
Module size	7 genes
NF	0.39
%ile	57.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.98	1621483_at	BQ796003	hypothetical protein LOC100254964	-	2e-6	At1g12810	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1611652_s_at	CF208983	hypothetical protein LOC100264196	-	2e-53	At4g14880	OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1620947_at	CB341977	hypothetical protein LOC100257258	-	8e-47	At5g53850	haloacid dehalogenase-like hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.98	1606902_a_at	CB982252	hypothetical protein LOC100248362	-	2e-7	At3g01280	VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.97	1620873_at	CB339891	hypothetical protein LOC100247687	-	1e-15	At2g37660	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1615943_at	CB971749	hypothetical protein LOC100266273	-	5e-14	At1g51980	mitochondrial processing peptidase alpha subunit, putative	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.98	1617183_at	CB339566	hypothetical protein LOC100258994	-	3e-19	At2g31490	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.4	99.4	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
7.7	99.3	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.9	96.6	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.2	94.9	GSM287871	Green hard berry C4 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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